Package: rshift 3.1.1

Alex H. Room

rshift: Paleoecology Functions for Regime Shift Analysis

Contains a variety of functions, based around regime shift analysis of paleoecological data. Citations: Rodionov() from Rodionov (2004) <doi:10.1029/2004GL019448> Lanzante() from Lanzante (1996) <doi:10.1002/(SICI)1097-0088(199611)16:11%3C1197::AID-JOC89%3E3.0.CO;2-L> Hellinger_trans from Numerical Ecology, Legendre & Legendre (ISBN 9780444538680) rolling_autoc from Liu, Gao & Wang (2018) <doi:10.1016/j.scitotenv.2018.06.276> Sample data sets lake_data & lake_RSI processed from Bush, Silman & Urrego (2004) <doi:10.1126/science.1090795> Sample data set January_PDO from NOAA: <https://www.ncei.noaa.gov/access/monitoring/pdo/>.

Authors:Alex H. Room [aut, cre, cph], Felipe Franco-Gaviria [ctb, fnd], Dunia H. Urrego [ctb, fnd], The authors of the dependency Rust crates [ctb]

rshift_3.1.1.tar.gz
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rshift.pdf |rshift.html✨
rshift/json (API)

# Install 'rshift' in R:
install.packages('rshift', repos = c('https://alexhroom.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/alexhroom/rshift/issues

Datasets:
  • January_PDO - Pacific Decadal Oscillation in January
  • lake_RSI - DCA-ordinated pollen data from Lake Consuelo with RSI values
  • lake_data - DCA-ordinated pollen data from Lake Consuelo

On CRAN:

ecologypaleoecologyregime-shift

4.00 score 4 stars 6 scripts 297 downloads 7 exports 31 dependencies

Last updated 3 months agofrom:a7b5cb1621. Checks:ERROR: 1 WARNING: 8. Indexed: yes.

TargetResultDate
Doc / VignettesFAILNov 10 2024
R-4.5-win-x86_64WARNINGNov 10 2024
R-4.5-linux-x86_64WARNINGNov 10 2024
R-4.4-win-x86_64WARNINGNov 10 2024
R-4.4-mac-x86_64WARNINGNov 10 2024
R-4.4-mac-aarch64WARNINGNov 10 2024
R-4.3-win-x86_64WARNINGNov 10 2024
R-4.3-mac-x86_64WARNINGNov 10 2024
R-4.3-mac-aarch64WARNINGNov 10 2024

Exports:absolute_to_percentageHellinger_transLanzanteregime_meansRodionovrolling_autocRSI_graph

Dependencies:clicolorspacedplyrfansifarvergenericsggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalestibbletidyselectutf8vctrsviridisLitewithr